Information for 16-AGTCACGGTC (Motif 30)

C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C T A C G A C G T A C T G C G T A A T G C A G C T
p-value:1e-4
log p-value:-9.937e+00
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.2 +/- 24.3bp
Average Position of motif in Background60.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:AGTCACGGTC---
--TCAAGGTCATA
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGTCACGGTC
AGTCACGC--
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTCACGGTC-----
-GTCACGCTCNCTGA
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGTCACGGTC-
-BTCAAGGTCA
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGTCACGGTC--
-TTCAAGGTCAT
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTCACGGTC------
TATTCAAGGTCATGCGA
 A C G T C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGTCACGGTC-
-NTCAAGGTCA
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGTCACGGTC-
AGGTCAAGGTCA
 A C G T C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AGTCACGGTC--
ACCACTCTCGGTCAC
 A C G T A C G T A C G T C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGTCACGGTC--
--TCAAGGTCAT
 C T G A A T C G A C G T A G T C C G T A A T G C A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T