Information for 17-TTMTTGAAYTKKG (Motif 27)

A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A G T A C C G T A C T G A A C G T A C G T A G T C C G T A C G T A A C T G C G T A T C G A
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.5 +/- 25.8bp
Average Position of motif in Background50.9 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTMTTGAAYTKKG-
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTMTTGAAYTKKG
NAAANTTATTGAANCAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTMTTGAAYTKKG
NTTATTGATTTTTT
 A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTMTTGAAYTKKG
NANTTCATTGAATTA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTMTTGAAYTKKG
TTCTAGAACGTTC
 A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTMTTGAAYTKKG
GGTTCCNNAATTTG-
 A C G T A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTMTTGAAYTKKG
ATTATCGATTTTTT
 A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTMTTGAAYTKKG
TTCTAGAACGTTC
 A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTMTTGAAYTKKG
ANTATCGATTTTTN
 A C G T A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTMTTGAAYTKKG-------
----TGGACTTTGNNCTNTG
 A C G T A C G T G T A C A C G T A C G T A C T G C G T A C G T A A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G