Information for 12-CGCWKTGCCW (Motif 24)

G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T
Reverse Opposite:
C G T A A C T G A C T G A T G C G C T A T G A C C G A T A C T G A G T C C A T G
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.651
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif397.8
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets52.8 +/- 27.9bp
Average Position of motif in Background50.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGCWKTGCCW--
---CGTGCCAAG
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:CGCWKTGCCW-
-----TGCCAA
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGCWKTGCCW---
---GGTGCCAAGT
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CGCWKTGCCW---
----ATGCCAACC
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGCWKTGCCW--
--CTGTTCCTGG
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CGCWKTGCCW---
----ATGCCCACC
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGCWKTGCCW--
----TTGCCAAG
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGCWKTGCCW---
----CTGCCCGCA
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCWKTGCCW------
GGGTGTGCCCAAAAGG
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCWKTGCCW
TKCTGTTCCA
 G T A C T C A G T G A C G C T A A C T G C G A T A T C G A G T C A G T C G C A T
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A