Information for 6-AAAYAWAWCA (Motif 35)

G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G G C A T A C G T G C A T A C G T C T A G G C A T A G C T C A G T
p-value:1e-5
log p-value:-1.363e+01
Information Content per bp:1.675
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif12.06%
Number of Background Sequences with motif3371.9
Percentage of Background Sequences with motif6.86%
Average Position of motif in Targets45.9 +/- 28.5bp
Average Position of motif in Background50.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAYAWAWCA-----
AACACCAAAACAAAGGA
 A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAYAWAWCA---
CAAACAACAACACCT
 A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAYAWAWCA-----
ATATCAAAACAAAACA
 A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAYAWAWCA-----
AAAAATAACAAACGG
 G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AAAYAWAWCA---
-AAACAAACATTC
 G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAYAWAWCA----
GACAGAGATATCAGTGT
 A C G T A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAAYAWAWCA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAYAWAWCA-
GGCCATAAATCAC
 A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAYAWAWCA---
GAAAAAATTGCAAGG
 A C G T A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAYAWAWCA
GCCATAAATCA
 A C G T G T C A C T G A C G T A G A T C C G T A C G T A G T C A C G T A A G T C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A