p-value: | 1e-8 |
log p-value: | -2.052e+01 |
Information Content per bp: | 1.924 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.5 +/- 20.9bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC ---NTTTTATGAC |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC ---NTTTTACGAC |
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Hoxa11/MA0911.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC- --ANTTTTACGACC |
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PH0065.1_Hoxc10/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC---- -ANNTTTTACGACNTNN |
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HOXD11/MA0908.1/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC ---NTTTTACGAC |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC- ---NTTTTATTACN |
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PH0076.1_Hoxd11/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC---- ANNATTTTACGACNTNA |
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PH0047.1_Hoxa11/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC---- -NNGTTTTACGACTTTA |
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PH0012.1_Cdx1/Jaspar
Match Rank: | 9 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC---- -NAATTTTATTACCTNN |
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PH0066.1_Hoxc11/Jaspar
Match Rank: | 10 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | ACATTTTTATGAC---- -NNNTTTTACGACNTTN |
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