Information for 13-AGAAGTGAAAAGARAR (Motif 21)

C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
Reverse Opposite:
A G C T A C G T A G C T C G A T A T G C A C G T C G A T A C G T A C G T A T G C C G T A A G T C C G A T A C G T A T G C A C G T
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.807
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 26.1bp
Average Position of motif in Background53.9 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
AAAAGTCAA-------
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTGAAAAGARAR
CGGAAGTGAAAC-----
 A C G T C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
GGAAGTGAAAST----
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTGAAAAGARAR
AAAAAGTAAACAAAGAC
 A C G T C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAAGTGAAAAGARAR
CAAAAGTAAACAAAG--
 A C G T C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
AGGTGTGAAA------
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
-AAAGTAAACA-----
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
-AAAGTAAACA-----
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGAAGTGAAAAGARAR
GAAAAGGTGTGAAAATT---
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAAGTGAAAAGARAR
--AAGTAAACAAA---
 C G T A A T C G C G T A C G T A A C T G A C G T T A C G C G T A C G T A C G T A G T C A A T C G C G T A C T G A C G T A C T G A
A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T