Information for 6-TACTGCCAGCCAG (Motif 18)

A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
Reverse Opposite:
A G T C C G A T C T A G C T A G A G T C G A C T C A T G A T C G T A G C C G T A A C T G A C G T C T G A
p-value:1e-9
log p-value:-2.286e+01
Information Content per bp:1.684
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif185.7
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.4 +/- 24.1bp
Average Position of motif in Background50.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TACTGCCAGCCAG
-SCTGTCAVTCAV
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TACTGCCAGCCAG
TGGCAGNCTGCCAG
 A C G T A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TACTGCCAGCCAG--
ACTATGCCAACCTACC
 A C G T A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TACTGCCAGCCAG
-------TGCCAA
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TACTGCCAGCCAG-
-----CGTGCCAAG
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TACTGCCAGCCAG
-NCTGTCAATCAN
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACTGCCAGCCAG
AGGTGNCAGACAG
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TACTGCCAGCCAG
AGGTGHCAGACA-
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TACTGCCAGCCAG
-----BCAGACWA
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TACTGCCAGCCAG
--ATGCCAACC--
 A G C T G T C A T G A C G C A T A C T G T A G C G A T C C T G A C T A G A G T C A G T C C G T A T C A G
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T