p-value: | 1e-9 |
log p-value: | -2.299e+01 |
Information Content per bp: | 1.735 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.93% |
Number of Background Sequences with motif | 6.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.5 +/- 23.0bp |
Average Position of motif in Background | 60.6 +/- 21.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox3/MA0514.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GARAACATAGGAGGGG -AAAACAAAGG----- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GARAACATAGGAGGGG- -----CACAGCAGGGGG |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GARAACATAGGAGGGG -GGAACAAAGR----- |
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PB0128.1_Gcm1_2/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GARAACATAGGAGGGG-- -TGCGCATAGGGGAGGAG |
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SP1/MA0079.3/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GARAACATAGGAGGGG- ------GGGGGCGGGGC |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GARAACATAGGAGGGG AGAAGAACAAAGGACTA- |
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GARAACATAGGAGGGG---- -----CAAAGGCGTGGCCAG |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GARAACATAGGAGGGG ATAAGAACAAAGGACTA- |
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PB0164.1_Smad3_2/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GARAACATAGGAGGGG---- ---NAGANTGGCGGGGNGNA |
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KLF5/MA0599.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | GARAACATAGGAGGGG- -------GGGGNGGGGC |
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