Information for 24-GGCAAAGCACGAC (Motif 39)

C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
Reverse Opposite:
A T C G A C G T A G T C T C A G C G A T A C T G G T A C G A C T A G C T C A G T A T C G A G T C A G T C
p-value:1e-6
log p-value:-1.411e+01
Information Content per bp:1.701
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif98.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets39.3 +/- 26.9bp
Average Position of motif in Background49.2 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCAAAGCACGAC--
-GCAAAACATTACTA
 C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C A C G T A C G T
A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCAAAGCACGAC-
GAGCACAGCAGGACA
 A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCAAAGCACGAC
TGGAACAGMA----
 A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCAAAGCACGAC
TAGGGCAAAGGTCA--
 A C G T A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCAAAGCACGAC
TNNGGGCAG--------
 A C G T A C G T A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCAAAGCACGAC
TGGGGCAAAGGTCA--
 A C G T A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCAAAGCACGAC-
GCAGCCAAGCGTGACN
 A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCAAAGCACGAC
TGGAAAA-------
 A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GGCAAAGCACGAC
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGCAAAGCACGAC
AAGGCAAGTGT----
 A C G T A C G T C T A G A C T G A T G C G C T A C T G A C T G A A C T G T G A C C G T A A G T C T A C G G T C A T A G C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T