Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-6 | -1.586e+01 | 0.0000 | 11.0 | 1.46% | 74.5 | 0.17% | motif file (matrix) |
svg |
2 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-6 | -1.567e+01 | 0.0000 | 9.0 | 1.20% | 46.0 | 0.11% | motif file (matrix) |
svg |
3 |
| GFY(?)/Promoter/Homer | 1e-6 | -1.462e+01 | 0.0001 | 11.0 | 1.46% | 84.4 | 0.20% | motif file (matrix) |
svg |
4 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -1.110e+01 | 0.0014 | 255.0 | 33.86% | 11533.9 | 26.90% | motif file (matrix) |
svg |
5 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-4 | -9.492e+00 | 0.0055 | 39.0 | 5.18% | 1132.5 | 2.64% | motif file (matrix) |
svg |
6 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.859e+00 | 0.0637 | 59.0 | 7.84% | 2202.0 | 5.14% | motif file (matrix) |
svg |
7 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.733e+00 | 0.0637 | 88.0 | 11.69% | 3603.0 | 8.40% | motif file (matrix) |
svg |
8 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.655e+00 | 0.0637 | 139.0 | 18.46% | 6179.4 | 14.41% | motif file (matrix) |
svg |
9 |
| Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer | 1e-2 | -6.582e+00 | 0.0637 | 28.0 | 3.72% | 848.6 | 1.98% | motif file (matrix) |
svg |
10 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -6.581e+00 | 0.0637 | 24.0 | 3.19% | 685.2 | 1.60% | motif file (matrix) |
svg |
11 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.394e+00 | 0.0637 | 12.0 | 1.59% | 246.5 | 0.58% | motif file (matrix) |
svg |
12 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.382e+00 | 0.0637 | 28.0 | 3.72% | 860.8 | 2.01% | motif file (matrix) |
svg |
13 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.898e+00 | 0.0769 | 60.0 | 7.97% | 2347.3 | 5.48% | motif file (matrix) |
svg |
14 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -5.856e+00 | 0.0769 | 9.0 | 1.20% | 164.7 | 0.38% | motif file (matrix) |
svg |
15 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.598e+00 | 0.0899 | 120.0 | 15.94% | 5376.8 | 12.54% | motif file (matrix) |
svg |
16 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.453e+00 | 0.0974 | 29.0 | 3.85% | 964.2 | 2.25% | motif file (matrix) |
svg |
17 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.453e+00 | 0.0974 | 46.0 | 6.11% | 1733.4 | 4.04% | motif file (matrix) |
svg |
18 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -5.209e+00 | 0.1106 | 19.0 | 2.52% | 557.6 | 1.30% | motif file (matrix) |
svg |
19 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.154e+00 | 0.1106 | 28.0 | 3.72% | 942.9 | 2.20% | motif file (matrix) |
svg |
20 |
| ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.124e+00 | 0.1106 | 40.0 | 5.31% | 1486.6 | 3.47% | motif file (matrix) |
svg |
21 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.113e+00 | 0.1106 | 37.0 | 4.91% | 1349.8 | 3.15% | motif file (matrix) |
svg |
22 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -4.999e+00 | 0.1116 | 77.0 | 10.23% | 3289.7 | 7.67% | motif file (matrix) |
svg |
23 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -4.701e+00 | 0.1438 | 32.0 | 4.25% | 1157.6 | 2.70% | motif file (matrix) |
svg |