Information for 3-TCTTAGCTCTTAGCCA (Motif 4)

G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G C T C T G A C G T A A T C G C T G A A C T G G T A C A G C T C T G A C T G A A C T G C G T A
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.3 +/- 19.2bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTTAGCTCTTAGCCA-
-CTTGGCANNNTGCCAA
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTTAGCTCTTAGCCA
--TTGGCATGGTGCCA
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTTAGCTCTTAGCCA
--CTGGCAGNCTGCCA
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTTAGCTCTTAGCCA
TTCTTATCTGT------
 A C G T G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTTAGCTCTTAGCCA
TCTTATCTCCC-----
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TCTTAGCTCTTAGCCA
NNTNANTTCTTATCTCTANANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:11
Orientation:reverse strand
Alignment:TCTTAGCTCTTAGCCA-
-----------TGCCAA
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCTTAGCTCTTAGCCA
AGATTCTTATCTGT------
 A C G T A C G T A C G T A C G T G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TCTTAGCTCTTAGCCA----
--------ACTAGCCAATCA
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TCTTAGCTCTTAGCCA--
---------CGTGCCAAG
 G A C T A G T C A G C T A G C T C T G A A C T G A G T C A G C T A T G C C G A T A G C T C T G A A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G