Information for 8-AGACAMATTG (Motif 25)

C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G
Reverse Opposite:
A G T C C T G A T C G A G A C T A C G T C A G T A C T G A G C T A G T C G A C T
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.554
Number of Target Sequences with motif303.0
Percentage of Target Sequences with motif40.24%
Number of Background Sequences with motif13524.9
Percentage of Background Sequences with motif31.55%
Average Position of motif in Targets48.5 +/- 26.2bp
Average Position of motif in Background49.9 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGACAMATTG
BCAGACWA----
 A C G T A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGACAMATTG----
YDGHTACAWTGTADC
 A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGACAMATTG----
TWGHWACAWTGTWDC
 A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACAMATTG
CCAGACAG----
 A C G T A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGACAMATTG-------
GGAAAAATTGTTAGGAA
 C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGACAMATTG-
ARGAGGMCAAAATGW
 A C G T A C G T A C G T A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGACAMATTG
AAGGCAAGTGT
 A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGACAMATTG
CCAGACRSVB--
 A C G T A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGACAMATTG-
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T A C G T C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGACAMATTG-----
GAAAAAATTGCAAGG
 C T G A T C A G T C G A T G A C G T C A T G C A C T G A A G C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G