Information for 12-GGAGCTGAGHTGT (Motif 24)

C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C G T C A C G T A A G T C A C G T A G T C C G T A T A C G A G T C A C G T T G A C G T A C
p-value:1e-6
log p-value:-1.565e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.5 +/- 22.3bp
Average Position of motif in Background37.2 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGAGHTGT
CGCAGCTGCG----
 A C G T C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGAGCTGAGHTGT-
---CTTGAGTGGCT
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGAGCTGAGHTGT
-CAGGTGAGG---
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGCTGAGHTGT
-CAGGTAAGTAT-
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGCTGAGHTGT
--TGCTGTGATTT
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGAGCTGAGHTGT--
-GAGGTCAAAGGTCA
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAGCTGAGHTGT
--AGGTGTGA---
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAGCTGAGHTGT---
AGAGTGCTGATTGGTCCA
 A C G T A C G T C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGCTGAGHTGT
HCAGCTGDTN---
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGAGCTGAGHTGT--
AGGGGTCAGAGGTCA
 C A T G A C T G C G T A A C T G A T G C A C G T A C T G C G T A A C T G G A C T A C G T A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A