Information for 9-DCATGCATGTRTK (Motif 21)

C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T
Reverse Opposite:
G T C A T G C A A G C T C T G A A G T C G T C A A C G T T C A G A T G C G T C A C G A T A C T G G C A T
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.641
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif704.9
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets47.6 +/- 23.6bp
Average Position of motif in Background47.7 +/- 43.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----DCATGCATGTRTK
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:DCATGCATGTRTK
-AAGGCAAGTGT-
 C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-DCATGCATGTRTK-
GTCATGCHTGRCTGS
 A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:DCATGCATGTRTK-
ACATTCATGACACG
 C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--DCATGCATGTRTK--
ANTNTTACATGTATNTA
 A C G T A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-DCATGCATGTRTK---
AAAATACATGTAATACT
 A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----DCATGCATGTRTK
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-DCATGCATGTRTK---
AATATACATGTAATATA
 A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:DCATGCATGTRTK
-CATGCGGGTAC-
 C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-DCATGCATGTRTK---
AATATACATGTAAAATT
 A C G T C G T A T G A C C G T A A C G T T A C G A G T C G T C A A C G T C T A G A G C T T C G A A C G T C A G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T