Information for 6-TGGCGTCTCTCCC (Motif 18)

A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
T C A G C T A G A C T G C G T A A C T G C G T A A C T G C G T A T G A C C A T G A G T C G T A C C G T A
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.4 +/- 29.1bp
Average Position of motif in Background59.3 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGTCTCTCCC
GYCTGGYYTNTGTCA-
 A C G T A C G T A C G T A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCGTCTCTCCC--
TGACCTTTGCCCTAN
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGCGTCTCTCCC
--NCTTCCCGCCC
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGCGTCTCTCCC-
TGACCTTTGCCCTA
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGCGTCTCTCCC-
TGACCTTTGCCCCA
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGGCGTCTCTCCC
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGGCGTCTCTCCC-
--GTTTCACTTCCG
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGCGTCTCTCCC--
TGACCTCTGACCCCN
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGCGTCTCTCCC----
--ACCACTCTCGGTCAC
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TGGCGTCTCTCCC
-------GCTCCG
 A C G T A C T G A C T G G A T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G