Information for 7-CTTGAAGGCTTGAGTG (Motif 13)

A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G
Reverse Opposite:
A T G C G T C A A G T C A C G T A G T C C G T A C G T A A C T G A G T C A G T C A G C T A G C T G T A C C G T A C G T A C T A G
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 23.2bp
Average Position of motif in Background49.5 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG---
--------CTTGAGTGGCT
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG--
--------CTYRAGTGSY
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CTTGAAGGCTTGAGTG--
--------BTBRAGTGSN
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG---
---------TTGAGTGSTT
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.58
Offset:9
Orientation:forward strand
Alignment:CTTGAAGGCTTGAGTG---
---------TTRAGTGSYK
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG---
---------TTAAGTGCTT
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG--
---------TTAAGTGGT
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG--
---------TTAAGTGGN
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTTGAAGGCTTGAGTG
--TTCACGCATGAGTT
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G
A C G T A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CTTGAAGGCTTGAGTG-
--------NTCAAGTGG
 A G T C A C G T A C G T A C T G C T G A C T G A A C T G A C T G G T A C A C G T A C G T C T A G C G T A A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G