Information for 5-SAGACAGCCATCYTCC (Motif 10)

T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A C T A G A C T G C T G A A C G T A C T G A C T G T A G C A C G T A T C G A G C T A G T C C G A T A T C G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.755
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 13.7bp
Average Position of motif in Background67.5 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:SAGACAGCCATCYTCC
---GCNGCCATCTTG-
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:SAGACAGCCATCYTCC
---GCCGCCATCTTG-
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:3
Score:0.62
Offset:7
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC-------
-------CCGTCTTCCCCCTCAC
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC
--GYCATCMATCAT--
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC
--GTCCGCCATTA---
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC
------GCCATCTGTT
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC
-----GGCCATTAAC-
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC-
-------CNGTCCTCCC
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.50
Offset:10
Orientation:forward strand
Alignment:SAGACAGCCATCYTCC
----------GCTTCC
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:SAGACAGCCATCYTCC---
--CCNNACCATCTGGCCTN
 T A G C C G T A T A C G T C G A A T G C G T C A A T C G A G T C A G T C C G T A A G C T A G T C G A T C A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T