Information for 11-GCATGCGCTCTGA (Motif 11)

T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
Reverse Opposite:
A G C T A T G C C G T A T A C G T C G A A C T G A T G C A C T G A G T C T G C A G A C T A T C G A T G C
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.772
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif39.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets45.2 +/- 28.0bp
Average Position of motif in Background40.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCATGCGCTCTGA
GTGCGCATGCGC-----
 A C G T A C G T A C G T A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCATGCGCTCTGA
CTGCGCATGCGC-----
 A C G T A C G T A C G T A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCATGCGCTCTGA
GCGCCTGCGCA----
 A C G T A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCATGCGCTCTGA-----
---TGACCTCTGACCCCN
 T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCATGCGCTCTGA----
---TGACCTTTGACCTC
 T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCATGCGCTCTGA
--CTGACCTTTG-
 T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCATGCGCTCTGA------
---TGGACTTTGNNCTNTG
 T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCATGCGCTCTGA
GTCACGCTCNCTGA
 A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCATGCGCTCTGA-
ANCGCGCGCCCTTNN
 A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCATGCGCTCTGA
GGCACGCGTC----
 A C G T T A C G A T G C C T G A A C G T A C T G G T A C A T C G A G T C A G C T A G T C C G A T A T C G T C G A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T A C G T