Information for 11-RCACACAGSAAACCAW (Motif 18)

C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
Reverse Opposite:
C G T A C G A T A C T G C A T G A C G T A C G T A G C T A T G C G T A C A C G T A C T G A C G T A C T G A C G T C T A G G A C T
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.736
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.1 +/- 29.0bp
Average Position of motif in Background55.1 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RCACACAGSAAACCAW
---NACAGGAAAT---
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RCACACAGSAAACCAW
---NACAGGAAAT---
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:RCACACAGSAAACCAW
---AACAGGAAGT---
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RCACACAGSAAACCAW
CGAAGCACACAAAATA----
 A C G T A C G T A C G T A C G T C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:forward strand
Alignment:RCACACAGSAAACCAW---
---------AAACCACANN
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:RCACACAGSAAACCAW
-----ACTGAAACCA-
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RCACACAGSAAACCAW
-GAGAACCGAAACTG-
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:RCACACAGSAAACCAW----
----ATATCAAAACAAAACA
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:RCACACAGSAAACCAW--
---CAAAAGTAAACAAAG
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:RCACACAGSAAACCAW
----ACAGGAAGTG--
 C T G A A G T C G T C A G T A C G T C A G T A C C G T A C A T G A T C G C T G A G T C A C G T A G T A C A G T C C G T A G C A T
A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T