Information for 8-CGGGAACTGCAGG (Motif 7)

G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C T G A G T C C G T A A T C G C A G T A C G T G T A C A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.144e+01
Information Content per bp:1.800
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif41.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.7 +/- 26.7bp
Average Position of motif in Background55.2 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGGAACTGCAGG---
----CACAGCAGGGGG
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGGAACTGCAGG
-GGGAATTGTAGT
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGGGAACTGCAGG-----
---DCHCAGCAGGRGGCC
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGGGAACTGCAGG
---DCTCAGCAGG
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGGAACTGCAGG---
AATCGCACTGCATTCCG
 A C G T G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGGAACTGCAGG---
-GAGCACAGCAGGACA
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:-9
Orientation:reverse strand
Alignment:---------CGGGAACTGCAGG
TGGCCANNNNNGGAACTGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGAACTGCAGG---
-CCACACAGCAGGAGA
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGGAACTGCAGG
-TGGAACAGMA--
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGGAACTGCAGG---
-CCACACAGCAGGAGA
 G T A C A C T G A C T G C A T G G T C A G T C A A T G C C G A T A C T G A G T C C G T A A C T G A T C G A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A