Information for 7-CAGAGGCGGKCTC (Motif 5)

A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G G T C A A G T C G A T C A C T G A G T C A G T C G C A T A G T C A C G T A T C G
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.828
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets53.5 +/- 19.3bp
Average Position of motif in Background57.9 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGAGGCGGKCTC
----GGCGCGCT-
 A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGKCTC
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGCGGKCTC---
NNANTGGTGGTCTTNNN
 A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGKCTC
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGAGGCGGKCTC
-GGGGGCGGGGCC
 A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGCGGKCTC--
NAGANTGGCGGGGNGNA
 A C G T A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAGAGGCGGKCTC-
AGGGGGCGGGGCTG
 A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAGGCGGKCTC
-GGGGGCGGGGC-
 A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CAGAGGCGGKCTC-
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGCGGKCTC-
GGNGCGNCTGTTNNN
 A C G T A T G C G T C A C T A G C G T A A C T G A C T G A G T C C T A G A C T G C A G T A G T C C G A T A G T C A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T