Information for 4-CTGGGARAGRAGTGMA (Motif 3)

A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A
Reverse Opposite:
A G C T A C T G A G T C G C T A A G T C A C G T A G T C A G T C A G C T G A T C C G A T A T G C G A T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.650e+01
Information Content per bp:1.823
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 27.5bp
Average Position of motif in Background48.0 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA---
----GAAAAAATTGCAAGG
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA--
------CGGAAGTGAAAC
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA
------AAGGTGTGAA
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA----
---GAAAAGGTGTGAAAATT
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGARAGRAGTGMA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA-
------TAGGTGTGAAG
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA---
-------GGAAGTGAAAST
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA---
------AAGGTGTGAAAAT
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGGGARAGRAGTGMA-
-------AGGTGTGAAA
 A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGARAGRAGTGMA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C G C A T A C T G C A T G A T C G C G T A C T A G C T G A C T A G C T A G C G T A A C T G C G A T A C T G G T A C C T G A A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A