Information for 6-ACTCGTTTTA (Motif 10)

C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G T A C G T A G T A C A C T G C T G A A C T G A C G T
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.871
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets58.9 +/- 30.9bp
Average Position of motif in Background45.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGTTTTA
NAAACCGGTTTT-
 A C G T A C G T A C G T C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACTCGTTTTA-----
-----TTTTATTRGN
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ACTCGTTTTA----
----NTTTTATTGG
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ACTCGTTTTA---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PH0075.1_Hoxd10/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTCGTTTTA-------
NTNAATTTTATTGNATT
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACTCGTTTTA-----
---DGWTTTATGRCN
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACTCGTTTTA
AAACCGGTTT--
 A C G T A C G T C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTCGTTTTA----
----TTTTTATTGG
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTCGTTTTA----
----NTTTTATTGG
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACTCGTTTTA----
----NTTTTATGAC
 C G T A A G T C A G C T T G A C C A T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C