p-value: | 1e-11 |
log p-value: | -2.542e+01 |
Information Content per bp: | 1.708 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.02% |
Number of Background Sequences with motif | 118.2 |
Percentage of Background Sequences with motif | 0.25% |
Average Position of motif in Targets | 50.9 +/- 20.7bp |
Average Position of motif in Background | 46.4 +/- 30.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACYATGGMAAC- TTGCCATGGCAACN |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.85 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TSACYATGGMAAC- TTGCCATGGCAACC |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 3 |
Score: | 0.85 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TSACYATGGMAAC GTTGCCATGGCAAC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 4 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TSACYATGGMAAC KGTTGCCATGGCAAC |
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RFX4/MA0799.1/Jaspar
Match Rank: | 5 |
Score: | 0.83 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TSACYATGGMAAC- CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 6 |
Score: | 0.82 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TSACYATGGMAAC- CGTTGCCATGGCAACG |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 7 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TSACYATGGMAAC-- GTTGCCATGGCAACCG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TSACYATGGMAAC- CGTTGCCATGGCAACG |
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RFX5/MA0510.2/Jaspar
Match Rank: | 9 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TSACYATGGMAAC- NGTTGCCATGGCAACG |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.73 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TSACYATGGMAAC-- ---SCCTAGCAACAG |
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