Information for 1-RGKGGGCGGGGCY (Motif 1)

T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
Reverse Opposite:
C T G A C T A G A G T C G A T C T G A C A G T C C T A G A G T C A G T C A G T C G T A C G A T C A G C T
p-value:1e-205
log p-value:-4.736e+02
Information Content per bp:1.658
Number of Target Sequences with motif457.0
Percentage of Target Sequences with motif48.51%
Number of Background Sequences with motif4496.2
Percentage of Background Sequences with motif9.54%
Average Position of motif in Targets51.9 +/- 24.6bp
Average Position of motif in Background49.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGGGCY
RGKGGGCGGAGC-
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGGGCY-
AGGGGGCGGGGCTG
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RGKGGGCGGGGCY
-GGGGGCGGGGCC
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:forward strand
Alignment:RGKGGGCGGGGCY
RGKGGGCGKGGC-
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:RGKGGGCGGGGCY
-GGGGGCGGGGC-
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---RGKGGGCGGGGCY
GGGNGGGGGCGGGGC-
 A C G T A C G T A C G T T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-RGKGGGCGGGGCY-
NNVDGGGYGGGGCYN
 A C G T T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:RGKGGGCGGGGCY
--GGGGNGGGGC-
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-RGKGGGCGGGGCY--
NNAGGGGCGGGGTNNA
 A C G T T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.89
Offset:2
Orientation:forward strand
Alignment:RGKGGGCGGGGCY
--TGGGTGGGGC-
 T C G A C T A G C A T G C T A G A C T G A C T G G A T C A C T G A C T G C T A G T C A G G A T C G A C T
A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T