Information for 17-ATTTDGGTATAAAATC (Motif 45)

G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C
Reverse Opposite:
C A T G C G T A C G A T A C G T G C A T C A G T G T C A C A G T C G T A T A G C T G A C G A T C C G T A C G T A T G C A C G A T
p-value:1e-2
log p-value:-6.253e+00
Information Content per bp:1.553
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif24.00%
Number of Background Sequences with motif2389.7
Percentage of Background Sequences with motif5.47%
Average Position of motif in Targets64.8 +/- 25.1bp
Average Position of motif in Background49.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC--
--CTACCAATAAAATTCT
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T A C G T
A C G T A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTTDGGTATAAAATC
AAAATATGCATAATAAA
 A C G T G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC-----
------GTATAAAAGGCGGGG
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC-----
------GTATAAAAGGCGGGG
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATTTDGGTATAAAATC-
--ATTTGCATACAATGG
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC---
---TAAGATTATAATACGG
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC-
--ACCCGTATCAAATTT
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T
A C G T A C G T G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC-
AATAGGGTATCATATAT
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ATTTDGGTATAAAATC
TNNTTTCGTATTNNANN
 A C G T G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATTTDGGTATAAAATC
-----GTCATAAAAN-
 G C T A A C G T G C A T G A C T C T A G A C T G A T C G G C A T G T C A A C G T G C T A C G T A C G T A G C T A G C A T G T A C
A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T