Information for 22-GCTAGCATGC (Motif 43)

A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A G T C
p-value:1e-2
log p-value:-6.773e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background32.4 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTAGCATGC----
CTACTAGGATGTNNTN
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGCATGC
GGTTGGCAT--
 A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCTAGCATGC
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTAGCATGC--
--TTGCGTGCVA
 A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTAGCATGC-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTAGCATGC--
GTGCGCATGCGC
 A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTAGCATGC
CCWGGAATGY
 A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCTAGCATGC
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTAGCATGC
CCWGGAATGY
 A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGCATGC
BTVATTWGCATA-
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T