Information for 20-TGGAATTAGT (Motif 42)

A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C A G T C C G T A
p-value:1e-2
log p-value:-6.773e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background54.7 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGGAATTAGT
NCTGGAATGC--
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGGAATTAGT
---AATTATT
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

PAX4/MA0068.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGGAATTAGT
-CTAATTAG-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

VSX2/MA0726.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGAATTAGT
-NTAATTAG-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGAATTAGT
NNGGATTAGN
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

VSX1/MA0725.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGAATTAGT
-NTAATTAG-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGAATTAGT
NGGGATTA--
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

EN1/MA0027.2/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGAATTAGT
-CTAATTAG-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGAATTAGT
-RGGATTAR-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGAATTAGT
-GTAATTAG-
 A C G T A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T