Information for 7-CTATAATCAG (Motif 26)

A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.466e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background53.1 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTATAATCAG--
--NTAATGAGCT
 A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTATAATCAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTATAATCAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATAATCAG-
ACTATAAATAGA
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATAATCAG-
GCTATAAATAGC
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTATAATCAG
--TTAATCCG
 A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PH0126.1_Obox6/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTATAATCAG-----
CNATAATCCGNTTNT
 A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATAATCAG-
TCTAAAAATAGA
 A C G T A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTATAATCAG-
-GNTAATTANN
 A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T
A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTATAATCAG-
---TAATTAGN
 A G T C A C G T C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C