Information for 4-TAAATAGGGC (Motif 24)

A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T C G T A
p-value:1e-3
log p-value:-7.466e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAAATAGGGC
CCAAAAATAG---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TAAATAGGGC--
GTACTAATTAGTGGCG
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAAATAGGGC
TTAATTAG---
 A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAAATAGGGC
KCCAAAAATAGC--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAATAGGGC--
TATAAGTAGGTCAA
 A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAATAGGGC
GTAAACA----
 A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAAATAGGGC-
-AAYTAGGTCA
 A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

PH0029.1_En2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAAATAGGGC-
NTNCACTAATTAGNGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
C G A T C A G T A G T C T A G C C T G A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T C A T G A G T C G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAAATAGGGC
DCYAAAAATAGM--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

PH0175.1_Vax2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAAATAGGGC
GTGCACTAATTAAGAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C T G A G T C
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C