Information for 2-AGTAAGDGAAGTTTTT (Motif 2)

C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
Reverse Opposite:
C T G A G T C A G T C A C T G A G T C A A G T C C G A T A C G T T G A C G C A T T A G C A C G T A G C T C G T A A T G C C G A T
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.691
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 35.4bp
Average Position of motif in Background37.0 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTAAGDGAAGTTTTT
-GAAAGTGAAAGT---
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGTAAGDGAAGTTTTT
AGAAACGAAAGT----
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTAAGDGAAGTTTTT
-GAAAGTGAAAGT---
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGTAAGDGAAGTTTTT
-GAAACTGAAACT---
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTAAGDGAAGTTTTT
AGAAAGTGAAAGTGA-
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGTAAGDGAAGTTTTT
-GRAASTGAAAST---
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:AGTAAGDGAAGTTTTT--
---CCTTGCAATTTTTNN
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T A C G T A C G T
A C G T A C G T A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.46
Offset:1
Orientation:forward strand
Alignment:AGTAAGDGAAGTTTTT
-GGAAGTGAAAST---
 C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--AGTAAGDGAAGTTTTT
AGAGGAAGTG--------
 A C G T A C G T C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-AGTAAGDGAAGTTTTT
ACGAAAGCGAAAGT---
 A C G T C G T A A T C G C G A T C T G A G T C A A T C G C G A T A C T G T G C A C G T A C T A G A C G T G A C T A C G T C A G T G A C T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T A C G T