Information for 2-GKYCACYRAS (Motif 18)

A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
Reverse Opposite:
A T C G A C G T A G T C T C A G C T A G A G C T A C T G C T A G G T C A A G T C
p-value:1e-4
log p-value:-9.329e+00
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif416.0
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets28.8 +/- 25.5bp
Average Position of motif in Background51.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GKYCACYRAS-
RGGGCACTAACY
 A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GKYCACYRAS--
NAGGTCANTGACCT
 A C G T A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GKYCACYRAS-
GGACCACCCACG
 A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZBTB7A/MA0750.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GKYCACYRAS
GGCGACCACCGA-
 A C G T A C G T A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GKYCACYRAS
GCGACCACCGAA
 A C G T A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GKYCACYRAS
AAGGTCAC----
 A C G T A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GKYCACYRAS
GCGACCACCGAA
 A C G T A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GKYCACYRAS-
AGGTCTCTAACC
 A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GKYCACYRAS
AGGTCA-----
 A C G T A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GKYCACYRAS
ATCCAC----
 A C T G C A G T A G T C A G T C C T G A A G T C A G C T C T A G G T C A A T G C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T