Information for 7-AAGGAVACCDTGC (Motif 16)

C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C G T C A G A T C A C T G A C T G A G C T A G T C C A G T A G T C A G T C A G C T A G C T
p-value:1e-4
log p-value:-1.064e+01
Information Content per bp:1.709
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif296.2
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets52.5 +/- 36.8bp
Average Position of motif in Background50.1 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAGGAVACCDTGC
---GAGSCCGAGC
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGAVACCDTGC---
-AGGTCACCCTGACCT
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C A C G T A C G T A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGAVACCDTGC-
ATAAATGACACCTATCA
 A C G T A C G T A C G T C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGGAVACCDTGC
CAAGGHCANV----
 A C G T C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAGGAVACCDTGC
-----GGACGTGC
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGGAVACCDTGC--
NAGGTCACNNTGACC
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGGAVACCDTGC
AAGGTCAC-----
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAGGAVACCDTGC
---GGGTACGTGC
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AAGGAVACCDTGC
GAGAACCGAAACTG---
 A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAGGAVACCDTGC
-----RTACGTGC
 C T G A C T G A C T A G A C T G G T C A T A C G C T G A G T A C A G T C C A T G A C G T A C T G A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C