Information for 7-VTDAAVHTTAGHTTDC (Motif 12)

T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
Reverse Opposite:
C T A G G C A T G C T A G T C A C A G T T G A C G A C T G C T A C T G A C A G T A G T C C G A T A C G T G C T A G T C A A G C T
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.627
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets64.3 +/- 35.0bp
Average Position of motif in Background48.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:VTDAAVHTTAGHTTDC
-GWAAYHTGAKMC---
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:VTDAAVHTTAGHTTDC----
---ANNTCTATTGTTCNNNA
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:VTDAAVHTTAGHTTDC
-------CAAGCTT--
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-VTDAAVHTTAGHTTDC
GCAAAACATTACTA---
 A C G T T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:VTDAAVHTTAGHTTDC
NWTAAYCYAATCAWN-
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:VTDAAVHTTAGHTTDC----
----AANTTATTGTTCTNNA
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:VTDAAVHTTAGHTTDC----
----NNTTTATTGTTCTNNN
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-VTDAAVHTTAGHTTDC
AATAAACAATN------
 A C G T T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:VTDAAVHTTAGHTTDC
-GWAAYHTGABMC---
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:VTDAAVHTTAGHTTDC--
--TAAGATTATAATACGG
 T C A G C A G T C G A T G T C A C G T A T C A G G T C A G A C T C G A T C G T A A C T G G C T A C A G T C A G T C G T A G A T C A C G T A C G T
A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G