Information for 1-CTDGAGTCCHAGVAAH (Motif 1)

A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
Reverse Opposite:
C T G A A C G T A C G T A G T C A G T C G A C T C A G T C T A G A C T G C G T A A G T C A C G T G T A C G A T C G T C A C T A G
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.700
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 33.9bp
Average Position of motif in Background42.2 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH
----TTTCCCAGAAN-
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH
----TTTCCTGGAAA-
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH-
-----TTCTNNAGAANT
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH
----TTTCTNAGAAAN
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH
-----TTCTNMGGAA-
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTDGAGTCCHAGVAAH
---ATTTCCAAGAA--
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTDGAGTCCHAGVAAH-
--TGTTKCCTAGCAACM
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T A C G T
A C G T A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH
-NNNTTTCCTGGAAA-
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTDGAGTCCHAGVAAH
NNNCTTTCCAGGAAA-
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTDGAGTCCHAGVAAH-
---ATTTCCNGGAAATN
 A G T C A C G T C A T G A C T G T G C A C T A G A C G T A G T C A G T C G C T A C T G A C T A G T A C G C G T A G T C A G A C T A C G T
A C G T A C G T A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G