Information for 24-GAATTCTGCAGCTCAA (Motif 38)

A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
Reverse Opposite:
A C G T A C G T T A C G T C G A A C T G G A T C A C G T A C T G A G T C C G T A T A C G G C T A C G T A C A G T A C G T A G T C
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.686
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif26.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.4 +/- 25.4bp
Average Position of motif in Background45.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:forward strand
Alignment:GAATTCTGCAGCTCAA
--------CAGCC---
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA
-----CAGCAGCTGN-
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA-
-------HCAGCTGDTN
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA
----NNAGCAGCTGCT
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA
-----NNGCAGCTGTC
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GAATTCTGCAGCTCAA
------ANCAGCTG--
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA-
-------GCAGCTGTNN
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAATTCTGCAGCTCAA
-----NNGCAGCTGTT
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAATTCTGCAGCTCAA
------AACAGCTG--
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAATTCTGCAGCTCAA----
---CTCAGCAGCTGCTACTG
 A C T G G T C A G C T A A C G T C A G T A G T C C G A T T A C G T G A C C G T A C A T G A G T C A C G T A G T C T C G A T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G