Information for 6-CCGATCGATGGCC (Motif 15)

A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G A G T C A T G C G T C A A C G T A G T C A C T G C G T A A C G T A G T C A C T G A C T G
p-value:1e-5
log p-value:-1.162e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 11.3bp
Average Position of motif in Background58.6 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGATCGATGGCC
-DGATCRATAN--
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGATCGATGGCC
-TGATTRATGGCY
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGATCGATGGCC
-TAATCGATAA--
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGATCGATGGCC
ATGATKGATGRC-
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGATCGATGGCC
-TGATTTATGGC-
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGATCGATGGCC
-TGATTTATGGCC
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGATCGATGGCC
HNRAATCAAT----
 A C G T A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGATCGATGGCC
-TGATTTATGGCC
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGATCGATGGCC
NNANTGATTGATNNNN
 A C G T A C G T A C G T A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGATCGATGGCC
-TAATCGATAA--
 A G T C A G T C A C T G G T C A A C G T A G T C A C T G C G T A A C G T A T C G A C T G A T G C A T G C
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T