Information for 25-AAAAGTAAATAAA (Motif 35)

C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A
Reverse Opposite:
C A G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G C T
p-value:1e-5
log p-value:-1.317e+01
Information Content per bp:1.866
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.4 +/- 22.0bp
Average Position of motif in Background44.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0015.1_Foxa2_1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
AAAAAGTAAACAAAGAC
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAAGTAAATAAA
AAAAGTCAA----
 C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
AAAAAGTAAACAAACAC
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
AAAAAGTAAACAAACAC
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXC2/MA0846.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AAAAGTAAATAAA
-TAAGTAAACAAA
 C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
AAAATGTAAACAAACAG
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
AAAATGTAAACAAACAG
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0019.1_Foxl1_1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA---
TAAATGTAAACAAAGGT
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAAAGTAAATAAA-
CAAAAGTAAACAAAG
 A C G T C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAAAGTAAATAAA
-AAAGTAAACA--
 C T G A C G T A C G T A C G T A A C T G A C G T T G C A C G T A C G T A C G A T T G C A G T C A G T C A
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T