Information for 17-GCAGTCAGTA (Motif 34)

A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.7 +/- 27.2bp
Average Position of motif in Background35.4 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTCAGTA--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCAGTCAGTA
TGAGTCAGCA
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGTCAGTA----
--NGTCAGCANTTT
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGTCAGTA------
-AAGTCAGCANTTTTN
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCAGTCAGTA-
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGTCAGTA
CCAGACAG--
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTCAGTA-
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCAGTCAGTA-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGTCAGTA
CCAATCAA--
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGTCAGTA----
---GTCAGCANNTN
 A C T G A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T