Information for 14-TAGRAARCTC (Motif 30)

A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C
Reverse Opposite:
A C T G C T G A A C T G G A C T A C G T C G A T A G C T A G T C A C G T G T C A
p-value:1e-7
log p-value:-1.808e+01
Information Content per bp:1.737
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif545.7
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets53.2 +/- 27.8bp
Average Position of motif in Background48.5 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAGRAARCTC----
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGRAARCTC--
--GGAAATTCCC
 A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAGRAARCTC
GGTTAGAGACCT-
 A C G T A C G T A C G T A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAGRAARCTC--
--GGAAANCCCC
 A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGRAARCTC
AGAGGAA----
 A C G T A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGRAARCTC--
--GGAAATTCCC
 A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGRAARCTC
ACTAGTTAAC--
 A C G T A C G T A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TAGRAARCTC--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAGRAARCTC---
-AGGAAACAGCTG
 A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C A C G T A C G T A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TAGRAARCTC
-AGATAASR-
 A C G T C G T A A C T G T C G A C G T A C G T A C T G A G T A C A G C T G T A C
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T