Information for 23-CTCACATTGTTAG (Motif 28)

A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
Reverse Opposite:
G T A C A C G T C T G A G T C A A G T C C G T A C G T A A C G T A C T G C G A T A C T G C G T A A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 23.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CTCACATTGTTAG
-----ATTGTTA-
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCACATTGTTAG
--CTCATTGTC--
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTCACATTGTTAG
---CCATTGTTYB
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCACATTGTTAG--
CTATAATTGTTAGCG
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTCACATTGTTAG
-----ATTGTT--
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTCACATTGTTAG
----CTTTGT---
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCACATTGTTAG--
TGTTCCCATTGTGTACT
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTCACATTGTTAG
---CCWTTGTYYB
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCACATTGTTAG-
-----ATTGTTTAN
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCACATTGTTAG
--NCCATTGTTC-
 A G T C A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A G C T C G T A A C T G
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T