Information for 19-BTGGCTAGMGCAG (Motif 25)

A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C T G G T A C A G C T G T C A C T A G G T A C A G T C G T C A T G C A
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.741
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif72.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.7 +/- 23.4bp
Average Position of motif in Background52.3 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:BTGGCTAGMGCAG-
--------CACAGN
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:BTGGCTAGMGCAG
---CCAGGAACAG
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:BTGGCTAGMGCAG
GRTGMTRGAGCC-
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--BTGGCTAGMGCAG--
GCGGCGATATCGCAGCG
 A C G T A C G T A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:BTGGCTAGMGCAG---
-AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:BTGGCTAGMGCAG
TWGTCTGV-----
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:BTGGCTAGMGCAG-------
-----GAGCACAGCAGGACA
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:BTGGCTAGMGCAG--
---GCTGASTCAGCA
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

POL002.1_INR/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:BTGGCTAGMGCAG----
---------TCAGTCTT
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:BTGGCTAGMGCAG------
-------SDGCAGGTGCNS
 A C G T A C G T A C T G A C T G G A T C A C G T C T G A C A T G T G A C C T A G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C