Information for 18-GAGTCACGTGNCR (Motif 24)

A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
Reverse Opposite:
A G C T A T C G C T A G A G T C C G T A A G T C A C T G A C G T A T C G C G T A A G T C G A C T A G T C
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.784
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 13.7bp
Average Position of motif in Background34.3 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
-GGTCACGTGGC-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
-GGTCACATGAC-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
BRGTCACGTGAC-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
--GTCACGTGAC-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTGNCR
-GGTCACGTGC--
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
--GTCACATGAY-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GAGTCACGTGNCR
CCGGTCACGTGA--
 A C G T A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
--GTCACGTGAT-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTGNCR
--GTCACGTGGM-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GAGTCACGTGNCR
--GTCACGTGGT-
 A C T G C T G A A C T G A C G T A T G C G T C A A G T C T A C G A C G T A C T G A G T C A T G C C T G A
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T