Information for 16-CCTCCAGCCCBCCTTG (Motif 18)

A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
Reverse Opposite:
A T G C G T C A G T C A A C T G A C T G T A C G C A T G A C T G A T C G A G T C C G A T A C T G A C T G C G T A A C T G A T C G
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.776
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 20.8bp
Average Position of motif in Background39.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCAGCCCBCCTTG
NCTTCCCGCCC------
 A C G T A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCAGCCCBCCTTG
NNTTCCCGCCC------
 A C G T A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCTCCAGCCCBCCTTG--
---SCAGYCADGCATGAC
 A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCCAGCCCBCCTTG
GGTCCCGCCC------
 A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTCCAGCCCBCCTTG
TTTCCCGCCMAV----
 A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCTCCAGCCCBCCTTG
TACGCCCCGCCACTCTG-
 A C G T A C G T A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTCCAGCCCBCCTTG
-TTCCCGCCWG-----
 A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTCCAGCCCBCCTTG
NYTTCCCGCC-------
 A C G T A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCTCCAGCCCBCCTTG
ACATCCTGNT-------
 A C G T A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCTCCAGCCCBCCTTG---
---GCAGCCAAGCGTGACN
 A T G C G T A C A C G T A G T C A G T C C G T A C T A G T A G C A G T C G T A C A T G C G T A C A G T C A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C