Information for 14-GCTTCAGCCTCTAATC (Motif 15)

A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C
Reverse Opposite:
A C T G C T G A C G A T A C G T C T G A T A C G C G T A A C T G C A T G A G T C C A G T C T A G G T C A C T G A C T A G T A G C
p-value:1e-11
log p-value:-2.631e+01
Information Content per bp:1.660
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets33.0 +/- 15.9bp
Average Position of motif in Background45.9 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTTCAGCCTCTAATC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:GCTTCAGCCTCTAATC--
----------YTAATCCY
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTTCAGCCTCTAATC
---BCAGACWA-----
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.51
Offset:10
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC--
----------TTAATCCG
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GCTTCAGCCTCTAATC-------
---------NNTAATCCNGNCNN
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC-
---------GCTAATCC
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC---
---------CCTAATCCGC
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC--
----------TTAATCCT
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC---
---------GCTAATCCCC
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.50
Offset:10
Orientation:forward strand
Alignment:GCTTCAGCCTCTAATC--
----------TTAATCCC
 A T C G G A T C A G C T A C G T G A T C G C T A A C T G G A T C A G T C A C G T A T G C A G C T C G T A C G T A G A C T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C