Information for 11-CGCCTCAGCCAATGGG (Motif 10)

T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
Reverse Opposite:
T G A C A G T C A T G C C G T A A C G T A C G T A C T G A T C G G A T C A C G T A C T G G C T A T C A G T C A G G T A C A T C G
p-value:1e-13
log p-value:-3.017e+01
Information Content per bp:1.689
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.2 +/- 12.1bp
Average Position of motif in Background58.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:6
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
------AGCCAATCGG
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
---ACTAGCCAATCA-
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
AGCCTCAGGCA-----
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
-AAATGGACCAATCAG
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
CGCCTCAGGCA-----
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG
AGCCTCAGGCA-----
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTCAGCCAATGGG
ANTGCCTGAGGCAAN---
 A C G T A C G T T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCCTCAGCCAATGGG--
---CTCACACAATGGCGC
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGCCTCAGCCAATGGG
-----VRAACAATGG-
 T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTCAGCCAATGGG
NTNGCCTCAGGCNNN---
 A C G T A C G T T A G C A C T G A G T C A G T C C A G T G T A C G T C A C T A G A T G C A G T C G T C A G T C A C G A T A T C G C T A G A C T G
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T A C G T