Information for 4-CAACASKGCCMCCTSS (Motif 5)

A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C
Reverse Opposite:
A T C G A T C G C G T A A C T G A C T G A C T G A C T G A C T G G T A C G T C A A T C G A C G T A T C G A G C T A C G T A C T G
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 16.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS----
CNNBRGCGCCCCCTGSTGGC
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS------
--ANAGTGCCACCTGGTGGCCA
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAACASKGCCMCCTSS
--ACAAAGGNBCCT--
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAACASKGCCMCCTSS------
---TAGCGCCCCCTGGTGGCCA
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS
CAAGATGGCGGC----
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS--
-GGTCCCGCCCCCTTCTC
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAACASKGCCMCCTSS--
------CGCCCCCTGACA
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

SP8/MA0747.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS
-GCCACGCCCACT---
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C
A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CAACASKGCCMCCTSS-
-------NNCACCTGNN
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAACASKGCCMCCTSS
NAGCCCCGCCCCCN--
 A G T C C G T A C T G A A T G C C G T A A T G C A C G T A C T G A G T C A G T C G T A C A G T C A G T C A C G T T A G C A T G C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T