Information for 5-ATGCGCATRTTCG (Motif 3)

C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
Reverse Opposite:
G A T C C A T G C G T A C G T A A G C T C G T A A C G T A C T G A G T C C T A G A G T C C G T A A C G T
p-value:1e-18
log p-value:-4.329e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 20.7bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGCGCATRTTCG
ATTTGCATAT---
 C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATGCGCATRTTCG
AATTTGCATANT--
 A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGCGCATRTTCG
TTCATTTGCATAT---
 A C G T A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATGCGCATRTTCG
CTAATTTGCATATT--
 A C G T A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGCGCATRTTCG
ATTTGCATAA---
 C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATRTTCG
AAATTAGCATAAT--
 A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGCGCATRTTCG
ATTTGCATA----
 C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGCGCATRTTCG
TNTAATTTGCATANNN-
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATRTTCG
TAATTTGCATAA---
 A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGCATRTTCG
TAATTTGCATAA---
 A C G T A C G T C G T A A C G T C T A G A G T C A C T G A G T C C G T A A C G T C T A G A C G T A C G T G A T C C T A G
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T