Information for 4-CACCAGGGGGCGC (Motif 2)

A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
Reverse Opposite:
A T C G A G T C A C T G A T G C G T A C G A T C A G T C A G T C C G A T A C T G A T C G G A C T A T C G
p-value:1e-22
log p-value:-5.068e+01
Information Content per bp:1.751
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif202.2
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets47.6 +/- 20.1bp
Average Position of motif in Background48.3 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGGGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.85
Offset:-4
Orientation:forward strand
Alignment:----CACCAGGGGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----CACCAGGGGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACCAGGGGGCGC----
NNNAAGGGGGCGGGNNN
 A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGGGCGC
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGGGGCGC
CACAGCAGGGGG---
 A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACCAGGGGGCGC
TGTCAGGGGGCG-
 A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACCAGGGGGCGC
NCNCAGCGGGGGGTC-
 A C G T A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACCAGGGGGCGC
CACAGCGGGGGGTC-
 A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACCAGGGGGCGC
CACCCCCGGGGGGG-
 A C G T A C G T A T G C C T G A T A G C G T A C G C T A A C T G T C A G C T A G C A T G A T C G T G A C T C A G A T G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T