Information for 5-THCTGCABCACAATGC (Motif 8)

G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C G T A C G T A C T G A C G T A C T G T C G A A C G T T C A G A G T C C G T A A T C G C T A G C G T A
p-value:1e-16
log p-value:-3.869e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.1 +/- 23.6bp
Average Position of motif in Background57.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
------VRRACAAWGG
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
------RNAACAATGG
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.68
Offset:8
Orientation:reverse strand
Alignment:THCTGCABCACAATGC-
--------GACAATGNN
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.67
Offset:9
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
---------ACAAAG-
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
------VRAACAATGG
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
------AAAACAATGG
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:THCTGCABCACAATGC
ATTTGCATAACAAAG-
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:THCTGCABCACAATGC---
--TCACGGAACAATAGGTG
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:THCTGCABCACAATGC----
----AATGAACAATGGAATT
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:THCTGCABCACAATGC
ATTTGCATAACAATG-
 G C A T G A T C A T G C C G A T C T A G A G T C C G T A A G C T G T A C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T